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nf-configs/conf/hebbe.config
2018-11-26 17:32:06 +01:00

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/*
* -------------------------------------------------
* Gothenburg Hebbe Cluster config file
* -------------------------------------------------
* http://www.c3se.chalmers.se/index.php/Hebbe
*/
singularity {
enabled = true
}
process {
executor = 'slurm'
clusterOptions = { "-A $params.project ${params.clusterOptions ?: ''}" }
/* The Hebbe scheduler fails if you try to request an amount of memory for a job */
withName: '*' { memory = null }
}
params {
igenomesIgnore = true
saveReference = true
max_memory = 64.GB
max_cpus = 20
max_time = 240.h
}