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23 lines
No EOL
829 B
YAML
23 lines
No EOL
829 B
YAML
name: Configs tests
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## Check whether users added their config to the matrix
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on:
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push:
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paths:
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- '.github/workflows/main.yml'
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jobs:
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profile_test:
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runs-on: ubuntu-latest
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name: Run individual profiles
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strategy:
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matrix:
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profile: ['awsbatch, bigpurple, binac, cbe, ccga_dx, ccga, cfc, crick, czbiohub_aws_highpriority, czbiohub_aws, denbi_qbic, genouest, gis, hebbe, kraken, munin, pasteur, phoenix, prince, shh, uct_hex, uppmax_devel, uppmax, uzh']
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steps:
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- uses: actions/checkout@v1
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- name: Install Nextflow
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run: |
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wget -qO- get.nextflow.io | bash
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sudo mv nextflow /usr/local/bin/
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- name: "Check profile"
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run: nextflow run ${GITHUB_WORKSPACE}/configtest.nf --custom_config_base=${GITHUB_WORKSPACE} -profile ${{ matrix.profile }} |