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52 lines
1.2 KiB
Text
52 lines
1.2 KiB
Text
//Profile config names for nf-core/configs
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params {
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config_profile_description = 'Generic MPI-EVA cluster(s) profile provided by nf-core/configs.'
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config_profile_contact = 'James Fellows Yates (@jfy133)'
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config_profile_url = 'https://eva.mpg.de'
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}
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// Preform work directory cleanup after a successful run
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cleanup = true
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singularity {
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enabled = true
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autoMounts = true
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}
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process {
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executor = 'sge'
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penv = 'smp'
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queue = 'all.q'
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}
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executor {
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queueSize = 8
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}
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profiles {
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archgen {
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params {
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igenomes_base = "/projects1/public_data/igenomes/"
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config_profile_description = 'MPI-EVA archgen profile, provided by nf-core/configs.'
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max_memory = 256.GB
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max_cpus = 32
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max_time = 720.h
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//Illumina iGenomes reference file path
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igenomes_base = "/projects1/public_data/igenomes/"
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}
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process {
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queue = 'archgen.q'
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}
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singularity {
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cacheDir = "/mnt/archgen/users/singularity_scratch"
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}
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}
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// Profile to deactivate automatic cleanup of work directory after a successful run. Overwrites cleanup option.
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debug {
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cleanup = false
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}
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}
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