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24 lines
644 B
Text
24 lines
644 B
Text
// Profile config names for nf-core/configs
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params {
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// Specific nf-core/configs params
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config_profile_contact = 'Maxime Garcia (@MaxUlysse)'
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config_profile_description = 'nf-core/sarek MUNIN profile provided by nf-core/configs'
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// Specific nf-core/sarek params
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annotation_cache = true
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pon = '/data1/PON/vcfs/BTB.PON.vcf.gz'
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pon_index = '/data1/PON/vcfs/BTB.PON.vcf.gz.tbi'
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snpEff_cache = '/data1/cache/snpEff/'
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vep_cache = '/data1/cache/VEP/'
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}
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// Specific nf-core/sarek process configuration
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process {
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withLabel:sentieon {
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if (params.sentieon) {
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module = 'sentieon/201808.05'
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container = ''
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}
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}
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}
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