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nf-configs/conf/ccga_med.config
marchoeppner 0830203b70 Adding new CCGA Med Cluster to profiles
Updating README and fixing linting errors in CCGA_MED profile

Fixing order in profile queue and removed leading slash from readme for ccga profile docs

Fixing order in profile queue and removed leading slash from readme for ccga profile docs
2020-02-11 11:12:51 +01:00

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//Profile config names for nf-core/configs
params {
config_profile_description = 'CCGA Med cluster profile provided by nf-core/configs.'
config_profile_contact = 'Marc Hoeppner (@marchoeppner)'
config_profile_url = 'https://www.ccga.uni-kiel.de/'
}
/*
* -------------------------------------------------
* Nextflow config file for CCGA cluster in Kiel
* -------------------------------------------------
*/
singularity {
enabled = true
runOptions = "-B /work_ifs -B /scratch"
cacheDir = "/work_ifs/ikmb_repository/singularity_cache/"
}
executor {
queueSize=100
}
process {
// Global process config
executor = 'slurm'
queue = 'all'
}
params {
// illumina iGenomes reference file paths on RZCluster
igenomes_base = '/work_ifs/ikmb_repository/references/iGenomes/references/'
saveReference = true
max_memory = 250.GB
max_cpus = 24
max_time = 120.h
}