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nf-configs/conf/google.config
2020-03-06 05:47:29 +00:00

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// Nextflow config file for running on Google Cloud Life Sciences
params {
config_profile_description = 'Google Cloud Life Sciences Profile'
config_profile_contact = 'Evan Floden, Seqera Labs (@evanfloden)'
config_profile_url = 'https://cloud.google.com/life-sciences'
google_zone = 'europe-west2-c'
google_bucket = false
google_debug = false
google_preemptible = true
}
process.executor = 'google-lifesciences'
google.zone = params.google_zone
google.lifeSciences.debug = params.google_debug
workDir = params.google_bucket
google.lifeSciences.preemptible = params.google_preemptible
if (google.lifeSciences.preemptible) {
process.errorStrategy = { task.exitStatus==14 ? 'retry' : 'terminate' }
process.maxRetries = 5
}