mirror of
https://github.com/MillironX/nf-configs.git
synced 2024-11-29 10:59:55 +00:00
26 lines
616 B
Text
26 lines
616 B
Text
//Profile config names for nf-core/configs
|
|
params {
|
|
config_profile_name = 'UPPMAX'
|
|
config_profile_description = 'Swedish UPPMAX cluster profile provided by nf-core/configs.'
|
|
config_profile_contact = 'Phil Ewels (@ewels)'
|
|
config_profile_url = 'https://www.uppmax.uu.se/'
|
|
}
|
|
|
|
singularity {
|
|
enabled = true
|
|
}
|
|
|
|
process {
|
|
executor = 'slurm'
|
|
clusterOptions = { "-A $params.project ${params.clusterOptions ?: ''}" }
|
|
}
|
|
|
|
params {
|
|
saveReference = true
|
|
|
|
max_memory = 128.GB
|
|
max_cpus = 16
|
|
max_time = 240.h
|
|
// illumina iGenomes reference file paths on UPPMAX
|
|
igenomes_base = '/sw/data/uppnex/igenomes/'
|
|
}
|