mirror of
https://github.com/MillironX/nf-configs.git
synced 2024-09-21 06:02:03 +00:00
25 lines
633 B
Text
25 lines
633 B
Text
//Profile config names for nf-core/configs
|
|
params {
|
|
config_profile_name = 'uct_hex'
|
|
config_profile_description = 'University of Cape Town HEX cluster config file provided by nf-core/configs.'
|
|
config_profile_contact = 'Katie Lennard (@kviljoen)'
|
|
config_profile_url = 'http://hpc.uct.ac.za/index.php/hex-3/'
|
|
}
|
|
|
|
singularity {
|
|
enabled = true
|
|
cacheDir = "/scratch/DB/bio/singularity-containers"
|
|
}
|
|
|
|
process {
|
|
stageInMode = 'symlink'
|
|
stageOutMode = 'rsync'
|
|
queue = 'UCTlong'
|
|
clusterOptions = { "-M $params.email -m abe -l nodes=1:ppn=1:series600" }
|
|
}
|
|
|
|
executor{
|
|
executor = 'pbs'
|
|
jobName = { "$task.tag" }
|
|
}
|
|
|