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64 lines
1.5 KiB
Text
64 lines
1.5 KiB
Text
// Profile config names for nf-core/configs
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params {
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// Specific nf-core/configs params
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config_profile_contact = 'James Fellows Yates (@jfy133)'
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config_profile_description = 'nf-core/eager MPCDF profile provided by nf-core/configs'
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}
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profile {
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cobra {
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// Specific nf-core/eager process configuration
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process {
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withName: malt {
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maxRetries = 1
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memory = 725.GB
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cpus = 40
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time = 24.h
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}
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withLabel:'sc_tiny'{
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cpus = { check_max( 1, 'cpus' ) }
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memory = { check_max( 1.GB * task.attempt, 'memory' ) }
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time = 24.h
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}
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withLabel:'sc_small'{
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cpus = { check_max( 1, 'cpus' ) }
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memory = { check_max( 4.GB * task.attempt, 'memory' ) }
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time = 24.h
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}
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withLabel:'sc_medium'{
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cpus = { check_max( 1, 'cpus' ) }
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memory = { check_max( 8.GB * task.attempt, 'memory' ) }
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time = 24.h
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}
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withLabel:'mc_small'{
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cpus = { check_max( 2 * task.attempt, 'cpus' ) }
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memory = { check_max( 4.GB * task.attempt, 'memory' ) }
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time = 24.h
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}
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withLabel:'mc_medium' {
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cpus = { check_max( 4 * task.attempt, 'cpus' ) }
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memory = { check_max( 8.GB * task.attempt, 'memory' ) }
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time = 24.h
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}
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withLabel:'mc_large'{
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cpus = { check_max( 8 * task.attempt, 'cpus' ) }
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memory = { check_max( 16.GB * task.attempt, 'memory' ) }
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time = 24.h
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}
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withLabel:'mc_huge'{
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cpus = { check_max( 32 * task.attempt, 'cpus' ) }
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memory = { check_max( 256.GB * task.attempt, 'memory' ) }
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time = 24.h
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}
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}
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}
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}
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