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nf-configs/conf/maestro.config
2021-10-04 15:08:01 +02:00

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params {
config_profile_description = 'Institut Pasteur Maestro cluster profile'
config_profile_url = 'https://research.pasteur.fr/en/equipment/maestro-compute-cluster/'
config_profile_contact = 'Pierre Luisi (@pierrespc)'
}
singularity {
enabled = true
autoMounts = true
runOptions = '--home $HOME:/home/$USER --bind /pasteur'
}
profiles {
normal {
process {
executor = 'slurm'
scratch = false
queue = 'common'
clusterOptions = '--qos=normal'
}
params {
igenomes_ignore = true
igenomesIgnore = true
max_memory = 400.GB
max_cpus = 96
max_time = 24.h
}
}
long {
process {
executor = 'slurm'
scratch = false
queue = 'common'
clusterOptions = '--qos=long'
}
params {
igenomes_ignore = true
igenomesIgnore = true
max_memory = 400.GB
max_cpus = 5
max_time = 8760.h
}
}
}