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nf-configs/conf/ceh.config
Åshild J. Vågene 8fa720b9cc
Update conf/ceh.config
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
2021-01-21 11:15:06 +01:00

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//Profile config names for nf-core/configs
params {
config_profile_description = 'Center for Evolutionary Hologenomics & Section for Evolutionary Genomics @ GLOBE - CEH profile provided by nf-core/configs.'
config_profile_contact = 'Aashild Vaagene (@ashildv)'
config_profile_url = 'https://ceh.ku.dk/
}
profiles {
ceh {
singularity {
enabled = true
autoMounts = true
cacheDir = '/shared/volume/hologenomics/data/cache/nf-eager/singularity'
}
process {
executor = 'slurm'
queue = { task.time < 24.h ? 'hologenomics-short' : task.time < 168.h ? 'hologenomics' : 'hologenomics-long' }
}
cleanup = true
executor {
queueSize = 8
}
params {
max_memory = 250.GB
max_cpus = 35
max_time = 720.h
}
}
}