mirror of
https://github.com/MillironX/nf-configs.git
synced 2024-11-29 02:49:55 +00:00
41 lines
960 B
Text
41 lines
960 B
Text
//Profile config names for nf-core/configs
|
|
params {
|
|
config_profile_description = 'CCGA cluster profile provided by nf-core/configs.'
|
|
config_profile_contact = 'Marc Hoeppner (@marchoeppner)'
|
|
config_profile_url = 'https://www.ccga.uni-kiel.de/'
|
|
}
|
|
|
|
/*
|
|
* -------------------------------------------------
|
|
* Nextflow config file for CCGA cluster in Kiel
|
|
* -------------------------------------------------
|
|
*/
|
|
|
|
singularity {
|
|
enabled = true
|
|
runOptions = "-B /ifs -B /scratch -B /work_beegfs"
|
|
cacheDir = "/ifs/data/nfs_share/ikmb_repository/singularity_cache/"
|
|
}
|
|
|
|
executor {
|
|
queueSize=100
|
|
}
|
|
|
|
process {
|
|
|
|
// Global process config
|
|
executor = 'slurm'
|
|
queue = 'ikmb_a'
|
|
|
|
clusterOptions = { "--qos=ikmb_a" }
|
|
|
|
}
|
|
|
|
params {
|
|
// illumina iGenomes reference file paths on RZCluster
|
|
igenomes_base = '/ifs/data/nfs_share/ikmb_repository/references/iGenomes/references/'
|
|
saveReference = true
|
|
max_memory = 128.GB
|
|
max_cpus = 16
|
|
max_time = 120.h
|
|
}
|