mirror of
https://github.com/MillironX/nf-configs.git
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13df59bfaf
reasons: * the kernel running on the compute nodes does not support overlayfs und thus containers downloaded from public registries won't run because they lack the /lustre mountpoint * building containers manually using the Singularity file would work, however nf-core pipelines will stop providing these files in future releases
24 lines
546 B
Text
24 lines
546 B
Text
//Profile config names for nf-core/configs
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params {
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config_profile_name = 'MENDEL'
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config_profile_description = 'GMI MENDEL cluster profile provided by nf-core/configs'
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config_profile_contact = 'Patrick Hüther (@phue)'
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config_profile_url = 'http://www.gmi.oeaw.ac.at/'
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}
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manifest {
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nextflowVersion = '>=19.01.0'
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}
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process {
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beforeScript = 'module load Miniconda3/4.6.7'
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executor = 'pbspro'
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clusterOptions = { "-P $params.project" }
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}
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params {
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max_cpus = 32
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max_memory = 128.GB
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max_time = 192.h
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igenomesIgnore = true
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}
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