mirror of
https://github.com/MillironX/nf-configs.git
synced 2024-11-22 16:29:55 +00:00
20 lines
947 B
Text
20 lines
947 B
Text
/*
|
|
* -------------------------------------------------
|
|
* nfcore/viralrecon custom profile Nextflow config file
|
|
* -------------------------------------------------
|
|
* Defines viral reference genomes for all environments.
|
|
*/
|
|
|
|
params {
|
|
// Genome reference file paths
|
|
genomes {
|
|
'NC_045512.2' {
|
|
fasta = "https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/genome/NC_045512.2/GCF_009858895.2_ASM985889v3_genomic.200409.fna.gz"
|
|
gff = "https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/genome/NC_045512.2/GCF_009858895.2_ASM985889v3_genomic.200409.gff.gz"
|
|
}
|
|
'MN908947.3' {
|
|
fasta = "https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/genome/MN908947.3/GCA_009858895.3_ASM985889v3_genomic.200409.fna.gz"
|
|
gff = "https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/genome/MN908947.3/GCA_009858895.3_ASM985889v3_genomic.200409.gff.gz"
|
|
}
|
|
}
|
|
}
|