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23 lines
598 B
Text
23 lines
598 B
Text
//Profile config names for nf-core/configs
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params {
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config_profile_description = 'University of Cape Town HEX cluster config file provided by nf-core/configs.'
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config_profile_contact = 'Katie Lennard (@kviljoen)'
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config_profile_url = 'http://hpc.uct.ac.za/index.php/hex-3/'
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}
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singularity {
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enabled = true
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cacheDir = "/scratch/DB/bio/singularity-containers"
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}
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process {
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stageInMode = 'symlink'
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stageOutMode = 'rsync'
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queue = 'UCTlong'
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clusterOptions = { "-M $params.email -m abe -l nodes=1:ppn=1:series600" }
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}
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executor{
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executor = 'pbs'
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jobName = { "$task.tag" }
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}
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