mirror of
https://github.com/MillironX/nf-configs.git
synced 2024-11-25 17:29:55 +00:00
25 lines
723 B
Text
Executable file
25 lines
723 B
Text
Executable file
//Profile config names for nf-core/configs
|
|
params {
|
|
config_profile_description = 'CLIP BATCH ENVIRONMENT (CBE) cluster profile provided by nf-core/configs'
|
|
config_profile_contact = 'Patrick Hüther (@phue)'
|
|
config_profile_url = 'https://clip.science'
|
|
}
|
|
|
|
process {
|
|
executor = 'slurm'
|
|
queue = { task.memory <= 170.GB ? 'c' : 'm' }
|
|
clusterOptions = { task.time <= 1.h ? '--qos rapid' : task.time <= 8.h ? '--qos short': task.time <= 48.h ? '--qos medium' : '--qos long' }
|
|
module = 'anaconda3/2019.10'
|
|
}
|
|
|
|
singularity {
|
|
enabled = true
|
|
cacheDir = '/resources/containers'
|
|
}
|
|
|
|
params {
|
|
params.max_time = 14.d
|
|
params.max_cpus = 36
|
|
params.max_memory = 4.TB
|
|
igenomes_base = '/resources/references/igenomes'
|
|
}
|