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19 lines
871 B
Markdown
19 lines
871 B
Markdown
# nf-core/configs Maestro (at Pateur Institute, Paris) Configuration
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To use, run the pipeline with `-profile maestro,<qos>` (with qos being long or normal). This will download and launch the maestro.config which has been pre-configured with a setup suitable for the Maestro cluster on either the long or normal qos.
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Using one of these profiles, a docker image containing all of the required software will be downloaded, and converted to a Singularity image before execution of the pipeline
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## needed Modules
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Please first load java, nextflow and singularity modules
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`module load java`
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`module load nextflow`
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`module load singularity`
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Also, do not forget to run nextflow using tmux or alike.
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## Other profiles at Pasteur
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If you are using TARS cluster, please refer to pasteur profile.
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Please refer to docs/pasteur.md for installing and running nf-core instructions.
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