mirror of
https://github.com/MillironX/nf-configs.git
synced 2024-11-24 00:59:55 +00:00
20 lines
623 B
Text
20 lines
623 B
Text
params {
|
|
config_profile_description = 'Van Andel Institute HPC profile provided by nf-core/configs.'
|
|
config_profile_contact = 'Nathan Spix (@njspix)'
|
|
config_profile_url = 'https://vanandelinstitute.sharepoint.com/sites/SC/SitePages/HPC3-High-Performance-Cluster-and-Cloud-Computing.aspx'
|
|
max_memory = 250.GB
|
|
max_cpus = 40
|
|
max_time = 640.h
|
|
}
|
|
|
|
process {
|
|
beforeScript = 'alias singularity=/varidata/research/software/singularity/singularity-ce-3.8.2/bin/singularity'
|
|
executor = 'pbs'
|
|
queue = { task.time <= 48.h ? 'shortq' : 'longq' }
|
|
maxRetries = 2
|
|
}
|
|
|
|
singularity {
|
|
enabled = true
|
|
autoMounts = true
|
|
}
|