name: bandage_image
description: Render an assembly graph in GFA 1.0 format to PNG and SVG image formats
keywords:
  - gfa
  - graph
  - assembly
  - visualisation
tools:
  - bandage:
    description: |
      Bandage - a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
    homepage: https://github.com/rrwick/Bandage
    documentation: https://github.com/rrwick/Bandage
    licence: ["GPL-3.0-or-later"]
input:
  - meta:
    type: map
    description: |
      Groovy Map containing sample information
      e.g. [ id:'test', single_end:false ]
  - gfa:
    type: file
    description: Assembly graph in GFA 1.0 format
    pattern: "*.gfa"
output:
  - meta:
    type: map
    description: |
      Groovy Map containing sample information
      e.g. [ id:'test', single_end:false ]
  - png:
    type: file
    description: Bandage image in PNG format
    pattern: "*.png"
  - svg:
    type: file
    description: Bandage image in SVG format
    pattern: "*.svg"
  - versions:
    type: file
    description: File containing software versions
    pattern: "versions.yml"
authors:
  - "@heuermh"
