- name: hmmer hmmsearch test_hmmer_hmmsearch
  command: nextflow run tests/modules/hmmer/hmmsearch -entry test_hmmer_hmmsearch -c tests/config/nextflow.config
  tags:
    - hmmer/hmmsearch
    - hmmer
  files:
    - path: output/hmmer/test.txt.gz
      contains:
        - '[ok]'
    - path: output/hmmer/versions.yml
      md5sum: ed0808c10abd205c6bd0fb01f45259bb

- name: hmmer hmmsearch test_hmmer_hmmsearch_optional
  command: nextflow run tests/modules/hmmer/hmmsearch -entry test_hmmer_hmmsearch_optional -c tests/config/nextflow.config
  tags:
    - hmmer/hmmsearch
    - hmmer
  files:
    - path: output/hmmer/test.sto.gz
      md5sum: d3121aa33455074c566fb7f8fdcda7b0
    - path: output/hmmer/test.domtbl.gz
      contains:
        - '# [ok]'
    - path: output/hmmer/test.tbl.gz
      contains:
        - '# [ok]'
    - path: output/hmmer/test.txt.gz
      contains:
        - '[ok]'
    - path: output/hmmer/versions.yml
      md5sum: ebdcb08ae540e840f7b5c4c75a3a2993
