mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-15 06:03:10 +00:00
17 lines
453 B
Text
17 lines
453 B
Text
|
#!/usr/bin/env nextflow
|
||
|
|
|
||
|
|
nextflow.enable.dsl = 2
|
||
|
|
|
||
|
|
include { MASH_DIST } from '../../../../modules/mash/dist/main.nf'
|
||
|
|
|
||
|
|
workflow test_mash_dist {
|
||
|
|
|
||
|
|
input = [
|
||
|
|
[ id:'test', single_end:false ], // meta map
|
||
|
|
file(params.test_data['sarscov2']['illumina']['contigs_fasta'], checkIfExists: true)
|
||
|
|
]
|
||
|
|
|
||
|
|
reference = file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true)
|
||
|
|
MASH_DIST ( input, reference )
|
||
|
|
}
|