2020-12-10 18:15:56 +00:00
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/lib/ @drpatelh
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2020-12-10 18:14:07 +00:00
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###########
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# Modules #
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###########
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2020-12-09 16:16:24 +00:00
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2020-12-10 18:14:07 +00:00
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# BWA
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bwa/ @drpatelh
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bwa/index @maxulysse
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bwa/index @jeremy1805
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# deeptools
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# TODO
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# FastQC
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fastqc/ @drpatelh @grst @ewels @FelixKrueger
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# gffread
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# TODO
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# hisat2
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# TODO
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# homer
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# TODO
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# macs2
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# TODO
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# multiqc
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multiqc @abhi18av @bunop @drpatelh
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# phantompeakqualtools
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# TODO
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# picard
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picard/ @drpatelh
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# preseq
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# TODO
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# qualimap
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# TODO
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# rsem
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# TODO
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# rseqc
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# TODO
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# salmon
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# TODO
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# samtools
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samtools/flagstat @drpatelh
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samtools/idexstats @drpatelh
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samtools/indes @drpatelh @ewels
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samtools/sort @drpatelh @ewels
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samtools/stats @drpatelh
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# sortmerna
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# TODO
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# star
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# TODO
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# stringtie
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# TODO
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# subread
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# TODO
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# trimgalore
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trimgalore/ @drpatelh @ewels @FelixKrueger
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# ucsc
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# TODO
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# umitools
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# TODO
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