nf-core_modules/tests/modules/ampir/test.yml

- name: ampir test_ampir
  command: nextflow run ./tests/modules/ampir -entry test_ampir -c ./tests/config/nextflow.config  -c ./tests/modules/ampir/nextflow.config
  tags:
    - ampir
  files:
    - path: output/ampir/test.tsv
      contains: ["seq_name\tseq_aa\tprob_AMP", "WP_014895017.1"]
    - path: output/ampir/test.faa
      md5sum: 0435609144022c55ac196db053f0df89
    - path: output/ampir/versions.yml
      md5sum: 4a11d25b8a904a7ffb34ae88f6826888
Implement suggestions from code review 2022-06-09 13:37:35 +00:00			`- name: ampir test_ampir`
			`command: nextflow run ./tests/modules/ampir -entry test_ampir -c ./tests/config/nextflow.config -c ./tests/modules/ampir/nextflow.config`
Create ampir module 2022-05-25 11:27:10 +00:00			`tags:`
Implement suggestions from code review 2022-06-09 13:37:35 +00:00			`- ampir`
Create ampir module 2022-05-25 11:27:10 +00:00			`files:`
Add file name collision check + TSV output 2022-06-10 10:54:39 +00:00			`- path: output/ampir/test.tsv`
			`contains: ["seq_name\tseq_aa\tprob_AMP", "WP_014895017.1"]`
Implement suggestions from code review 2022-06-09 13:37:35 +00:00			`- path: output/ampir/test.faa`
Add full user options for AMPir 2022-06-09 14:59:00 +00:00			`md5sum: 0435609144022c55ac196db053f0df89`
Create ampir module 2022-05-25 11:27:10 +00:00			`- path: output/ampir/versions.yml`
			`md5sum: 4a11d25b8a904a7ffb34ae88f6826888`