nf-core_modules/tests/modules/stranger/test.yml

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- name: stranger test_stranger
command: nextflow run tests/modules/stranger -entry test_stranger -c tests/config/nextflow.config
tags:
- stranger
files:
- path: output/expansionhunter/test.vcf
md5sum: cfd4a1d35c0e469b99eb6aaa6d22de76
- path: output/expansionhunter/versions.yml
md5sum: f3962a6eecfddf9682414c0f605a885a
- path: output/stranger/test.vcf.gz
md5sum: 68b0ca1319851134ffa8793a4704dc11
- path: output/stranger/versions.yml
md5sum: 5ec35fd835fb1be50bc3e7c004310fc0
- name: stranger test_stranger_without_optional_variant_catalog
command: nextflow run tests/modules/stranger -entry test_stranger_without_optional_variant_catalog -c tests/config/nextflow.config
tags:
- stranger
files:
- path: output/expansionhunter/test.vcf
md5sum: cfd4a1d35c0e469b99eb6aaa6d22de76
- path: output/expansionhunter/versions.yml
md5sum: c95af9e6d8cd9bd2ce1090ca4e7a6020
- path: output/stranger/test.vcf.gz
md5sum: bbe15159195681d5c18596d3ad85c78f
- path: output/stranger/versions.yml
md5sum: 8558542a007e90ea5dcdceed3f12585d
2022-04-22 08:10:43 +00:00
- name: stranger test_stranger_without_optional_variant_catalog_stubs
command: nextflow run tests/modules/stranger -entry test_stranger_without_optional_variant_catalog -c tests/config/nextflow.config -stub-run
tags:
- stranger
files:
- path: output/expansionhunter/test.vcf
- path: output/expansionhunter/versions.yml
- path: output/stranger/test.vcf.gz
- path: output/stranger/versions.yml