mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-22 11:08:17 +00:00
45 lines
1.1 KiB
YAML
45 lines
1.1 KiB
YAML
|
name: lissero
|
||
|
|
description: Serogrouping Listeria monocytogenes assemblies
|
||
|
|
keywords:
|
||
|
|
- fasta
|
||
|
|
- Listeria monocytogenes
|
||
|
|
- serogroup
|
||
|
|
tools:
|
||
|
|
- lissero:
|
||
|
|
description: In silico serotyping of Listeria monocytogenes
|
||
|
|
homepage: https://github.com/MDU-PHL/LisSero/blob/master/README.md
|
||
|
|
documentation: https://github.com/MDU-PHL/LisSero/blob/master/README.md
|
||
|
|
tool_dev_url: https://github.com/MDU-PHL/lissero
|
||
|
|
doi: ""
|
||
|
|
licence: ['GPL v3']
|
||
|
|
|
||
|
|
input:
|
||
|
|
- meta:
|
||
|
|
type: map
|
||
|
|
description: |
|
||
|
|
Groovy Map containing sample information
|
||
|
|
e.g. [ id:'test', single_end:false ]
|
||
|
|
- fasta:
|
||
|
|
type: file
|
||
|
|
description: FASTA assembly file
|
||
|
|
pattern: "*.{fasta,fasta.gz,fa,fa.gz,fna,fna.gz}"
|
||
|
|
|
||
|
|
output:
|
||
|
|
- meta:
|
||
|
|
type: map
|
||
|
|
description: |
|
||
|
|
Groovy Map containing sample information
|
||
|
|
e.g. [ id:'test', single_end:false ]
|
||
|
|
- versions:
|
||
|
|
type: file
|
||
|
|
description: File containing software versions
|
||
|
|
pattern: "versions.yml"
|
||
|
|
- tsv:
|
||
|
|
type: file
|
||
|
|
description: Tab-delimited result file
|
||
|
|
pattern: "*.tsv"
|
||
|
|
|
||
|
|
authors:
|
||
|
|
- "@rpetit3"
|
||
|
|
|