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15 lines
464 B
Text
15 lines
464 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { BEDTOOLS_MASKFASTA } from '../../../../software/bedtools/maskfasta/main.nf' addParams( options: [:] )
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workflow test_bedtools_maskfasta {
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def input,fasta = []
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bed = [ [ id:'test'],
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file("${launchDir}/tests/data/bed/C.bed", checkIfExists: true) ]
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fasta = [ file("${launchDir}/tests/data/fasta/E_coli/NC_010473.fa", checkIfExists: true) ]
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BEDTOOLS_MASKFASTA( bed, fasta )
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}
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