2019-12-05 09:53:38 -05:00
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name: samtools index
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2019-12-05 09:44:10 -05:00
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on:
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2019-12-05 10:09:28 -05:00
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push: {}
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2019-12-05 09:44:10 -05:00
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pull_request:
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2019-12-05 09:53:38 -05:00
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paths: tools/samtools/index*
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2019-12-05 09:44:10 -05:00
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jobs:
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2019-12-05 10:03:00 -05:00
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run_ci_test:
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2019-12-05 09:44:10 -05:00
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runs-on: ubuntu-latest
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steps:
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# Check out the repository
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- uses: actions/checkout@v1
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2019-12-06 03:24:33 -05:00
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submodules: true
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2019-12-05 09:44:10 -05:00
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2019-12-05 10:03:00 -05:00
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- name: Install Nextflow
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run: |
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wget -qO- get.nextflow.io | bash
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sudo mv nextflow /usr/local/bin/
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2019-12-05 09:44:10 -05:00
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# Test the module
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2019-12-05 16:20:02 -05:00
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- run: nextflow run ./tools/samtools/index/test/ -ansi-log false
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