nf-core_modules/modules/pairtools/flip/meta.yml

44 lines
1 KiB
YAML
Raw Normal View History

name: pairtools_flip
description: Flip pairs to get an upper-triangular matrix
keywords:
- flip
tools:
- pairtools:
description: CLI tools to process mapped Hi-C data
homepage: http://pairtools.readthedocs.io/
documentation: http://pairtools.readthedocs.io/
tool_dev_url: https://github.com/mirnylab/pairtools
doi: ""
licence: ['MIT']
input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- sam:
type: file
description: pair file
- chromsizes:
type: file
description: chromosome size file
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- version:
type: file
description: File containing software version
pattern: "*.{version.txt}"
- flip:
type: file
description: output file of flip
pattern: "*.{flip.gz}"
authors:
- "@jianhong"