nf-core_modules/modules/preseq/lcextrap/meta.yml

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name: preseq_lcextrap
description: Software for predicting library complexity and genome coverage in high-throughput sequencing
keywords:
- preseq
- library
- complexity
tools:
- preseq:
description: Software for predicting library complexity and genome coverage in high-throughput sequencing
homepage: http://smithlabresearch.org/software/preseq/
documentation: None
tool_dev_url: None
doi: ""
licence: ['GPL']
input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- bam:
type: file
description: BAM/CRAM/SAM file
pattern: "*.{bam,cram,sam}"
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- version:
type: file
description: File containing software version
pattern: "*.{version.txt}"
- ccurve:
type: file
description: File containing output of Preseq lcextrap
pattern: "*.{ccurve.txt}"
- log:
type: file
description: Log file containing stderr produced by Preseq
pattern: "*.{log}"
authors:
- "@drpatelh"