mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-10 20:23:10 +00:00
13 lines
405 B
Text
13 lines
405 B
Text
|
process {
|
||
|
|
||
|
publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
|
||
|
|
||
|
withName: TRIMMOMATIC_SE {
|
||
|
ext.args2 = 'ILLUMINACLIP:TruSeq3-SE:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36'
|
||
|
}
|
||
|
|
||
|
withName: TRIMMOMATIC_PE {
|
||
|
ext.args2 = 'ILLUMINACLIP:TruSeq3-PE.fa:2:30:10 LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15 MINLEN:36'
|
||
|
}
|
||
|
}
|