nf-core_modules/software/bedtools/intersect/test/main.nf

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2020-07-14 14:17:23 +00:00
#!/usr/bin/env nextflow
nextflow.preview.dsl = 2
params.intersect_args = '' //'-bed -c -f 0.20'
include check_output from '../../../../tests/functions/check_process_outputs.nf' // params(params)
include INTERSECT_BED from '../main.nf' params(params)
// Define input channels
ch_input_1 = Channel.fromPath('./input_data/A.bed')
ch_input_2 = Channel.fromPath('./input_data/B.bed')
// Run the workflow
workflow {
INTERSECT_BED(ch_input_1, ch_input_2, params.intersect_args)
// .check_output()
}