nf-core_modules/modules/bowtie/build/meta.yml

name: bowtie_build
description: Create bowtie index for reference genome
keywords:
    - index
    - fasta
    - genome
    - reference
tools:
    - bowtie:
          description: |
              bowtie is a software package for mapping DNA sequences against
              a large reference genome, such as the human genome.
          homepage: http://bowtie-bio.sourceforge.net/index.shtml
          documentation: http://bowtie-bio.sourceforge.net/manual.shtml
          arxiv: arXiv:1303.3997
          licence: ['Artistic-2.0']
input:
    - fasta:
          type: file
          description: Input genome fasta file
output:
    - index:
          type: file
          description: Bowtie genome index files
          pattern: "*.ebwt"
    - versions:
          type: file
          description: File containing software versions
          pattern: "versions.yml"
authors:
    - "@kevinmenden"
    - "@drpatelh"
Rename bowtie_index to bowtie_build 2021-02-01 17:53:31 +00:00			`name: bowtie_build`
added module yml files 2020-12-08 12:40:32 +00:00			`description: Create bowtie index for reference genome`
			`keywords:`
			`- index`
			`- fasta`
			`- genome`
			`- reference`
			`tools:`
			`- bowtie:`
fixed linting errors 2020-12-18 08:50:05 +00:00			`description: \|`
			`bowtie is a software package for mapping DNA sequences against`
			`a large reference genome, such as the human genome.`
			`homepage: http://bowtie-bio.sourceforge.net/index.shtml`
			`documentation: http://bowtie-bio.sourceforge.net/manual.shtml`
			`arxiv: arXiv:1303.3997`
Backfill software licenses meta (#876) * backfilled modules with meta.yml that had no license identifier * harmonized BSD license names * whitespace linting at modules/unzip/meta.yml:12 * harmonized software from US NIH-NCBI/NIST to 'US-Government-Work' * Update modules/bcftools/index/meta.yml `bcftools` is dual-licensed, use associative array to allow for multiple licenses Co-authored-by: Michael L Heuer <heuermh@acm.org> Co-authored-by: Michael L Heuer <heuermh@acm.org> 2021-10-22 22:39:54 +00:00			`licence: ['Artistic-2.0']`
added module yml files 2020-12-08 12:40:32 +00:00			`input:`
			`- fasta:`
fixed linting errors 2020-12-18 08:50:05 +00:00			`type: file`
			`description: Input genome fasta file`
added module yml files 2020-12-08 12:40:32 +00:00			`output:`
			`- index:`
fixed linting errors 2020-12-18 08:50:05 +00:00			`type: file`
			`description: Bowtie genome index files`
			`pattern: "*.ebwt"`
Update versions key in meta.yml for all modules (#787) 2021-10-03 07:20:26 +00:00			`- versions:`
fixed linting errors 2020-12-18 08:50:05 +00:00			`type: file`
Update versions key in meta.yml for all modules (#787) 2021-10-03 07:20:26 +00:00			`description: File containing software versions`
Bulk update modules to use versions.yml (#739) * New functions.nf * Convert code to create versions.yml * Update meta.yml * update output channel * Fix more meta.yml * Manually update remaining modules * remove superflous echo * Fix misformatted meta.yml files * Fix yaml, was list instead of dict * fix version for bcftools Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-09-27 08:41:24 +00:00			`pattern: "versions.yml"`
added module yml files 2020-12-08 12:40:32 +00:00			`authors:`
			`- "@kevinmenden"`
Rename bowtie_index to bowtie_build 2021-02-01 17:53:31 +00:00			`- "@drpatelh"`