nf-core_modules/tests/modules/metaphlan3/nextflow.config

process {

    publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }

    withName: SAMTOOLS_VIEW {
        ext.suffix = '.sam'
    }

    withName: METAPHLAN3 {
        ext.args = '--index mpa_v30_CHOCOPhlAn_201901 --add_viruses --bt2_ps very-sensitive-local'
    }

}