nf-core_modules/tests/modules/gunc/run/test.yml

- name: gunc run
  command: nextflow run ./tests/modules/gunc/run -entry test_gunc_run -c tests/config/nextflow.config
  tags:
    - gunc
    - gunc/run
  files:
    - path: output/gunc/GUNC.progenomes_2.1.maxCSS_level.tsv
      md5sum: 0420c1a9f2c50fefaee9fab5d80a551a
New module: `gunc run` (+ `gunc downloaddb`) (#880) * Specify more guidelines on input channels * Linting * Updates based on code review * Update README.md * Fix broken sentence * feat: add megahit module, currently decompressed output * Update main.nf * Update tests/modules/megahit/test.yml Co-authored-by: Maxime Borry <maxibor@users.noreply.github.com> * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * feat: compress all outputs, remove md5sums due to gz stochasicity * fix: wrong conda channel for pigz * fix: broken singleend tests and update meta.yml * Missed one * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * fix: pigz formatting * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * Apply suggestions from code review * Add GUNC download_db and run commands * Bump with version without zgrep * Apply suggestions from code review Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com> * Harshil formatting * Apply suggestions from code review Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> Co-authored-by: Maxime Borry <maxibor@users.noreply.github.com> Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com> 2021-11-03 16:01:23 +00:00			`- name: gunc run`
			`command: nextflow run ./tests/modules/gunc/run -entry test_gunc_run -c tests/config/nextflow.config`
			`tags:`
			`- gunc`
			`- gunc/run`
			`files:`
			`- path: output/gunc/GUNC.progenomes_2.1.maxCSS_level.tsv`
			`md5sum: 0420c1a9f2c50fefaee9fab5d80a551a`