mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-15 14:13:09 +00:00
16 lines
719 B
YAML
16 lines
719 B
YAML
|
- name: ariba run test_ariba_run
|
||
|
|
command: nextflow run ./tests/modules/ariba/run -entry test_ariba_run -c ./tests/config/nextflow.config -c ./tests/modules/ariba/run/nextflow.config
|
||
|
|
tags:
|
||
|
|
- ariba
|
||
|
|
- ariba/run
|
||
|
|
files:
|
||
|
|
- path: output/ariba/test/assembled_genes.fa.gz
|
||
|
|
- path: output/ariba/test/assembled_seqs.fa.gz
|
||
|
|
- path: output/ariba/test/assemblies.fa.gz
|
||
|
|
- path: output/ariba/test/debug.report.tsv
|
||
|
|
contains: ["ariba_ref_name", "reads", "free_text", "known_var_change"]
|
||
|
|
- path: output/ariba/test/report.tsv
|
||
|
|
contains: ["ariba_ref_name", "reads", "free_text", "known_var_change"]
|
||
|
|
- path: output/ariba/test/version_info.txt
|
||
|
|
contains: ["ARIBA", "Python", "OK", "True"]
|