nf-core_modules/tests/software/unicycler/test.yml

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- name: unicycler single-end
command: nextflow run ./tests/software/unicycler -entry test_unicycler_single_end -c tests/config/nextflow.config
tags:
- unicycler
files:
- path: output/unicycler/test.scaffolds.fa
- path: output/unicycler/test.assembly.gfa
- path: output/unicycler/test.unicycler.log
contains:
- "Assembly complete"
- name: unicycler paired-end
command: nextflow run ./tests/software/unicycler -entry test_unicycler_paired_end -c tests/config/nextflow.config
tags:
- unicycler
files:
- path: output/unicycler/test.scaffolds.fa
- path: output/unicycler/test.assembly.gfa
- path: output/unicycler/test.unicycler.log
contains:
- "Assembly complete"