nf-core_modules/tests/modules/fgbio/groupreadsbyumi/test.yml

- name: fgbio groupreadsbyumi test_fgbio_groupreadsbyumi
  command: nextflow run tests/modules/fgbio/groupreadsbyumi -entry test_fgbio_groupreadsbyumi -c tests/config/nextflow.config
  tags:
    - fgbio
    - fgbio/groupreadsbyumi
  files:
    - path: output/fgbio/test_umi-grouped.bam
      md5sum: f1e53fc845fd99a3da172eb8063dff0b
    - path: output/fgbio/test_umi_histogram.txt
      md5sum: d17fd167b2a765d46e4b01bf08ece01b
Fgbio group reads by umi (#952) * adding template for module groupreadsbyumi * update modules with code * strategy is required argument so moving it to input rather than options.args * tests successful committing yml * added meta to output Co-authored-by: Gregor Sturm <mail@gregor-sturm.de> 2021-10-29 12:00:54 +00:00			`- name: fgbio groupreadsbyumi test_fgbio_groupreadsbyumi`
			`command: nextflow run tests/modules/fgbio/groupreadsbyumi -entry test_fgbio_groupreadsbyumi -c tests/config/nextflow.config`
			`tags:`
			`- fgbio`
			`- fgbio/groupreadsbyumi`
			`files:`
			`- path: output/fgbio/test_umi-grouped.bam`
			`md5sum: f1e53fc845fd99a3da172eb8063dff0b`
			`- path: output/fgbio/test_umi_histogram.txt`
			`md5sum: d17fd167b2a765d46e4b01bf08ece01b`