nf-core_modules/tests/modules/malt/run/test.yml

- name: malt run test_malt_run
  command: nextflow run ./tests/modules/malt/run -entry test_malt_run -c ./tests/config/nextflow.config  -c ./tests/modules/malt/run/nextflow.config
  tags:
    - malt/run
    - malt
  files:
    - path: output/malt/test-malt-run.log
      contains:
        - "Peak memory"
    - path: output/malt/test_1.rma6
Update MALT to older version due to major bug in most recent version (#1796) * Rollback version * Start work rollback to 0.4.1 * Further changes * Re do dynamic flag creation * Prettier. 2022-06-20 06:20:22 +00:00			`- name: malt run test_malt_run`
			`command: nextflow run ./tests/modules/malt/run -entry test_malt_run -c ./tests/config/nextflow.config -c ./tests/modules/malt/run/nextflow.config`
module: MALT/RUN (#646) * Specify more guidelines on input channels * Linting * Updates based on code review * Update README.md * Fix broken sentence * Add MALT with incomplete tests * Parameter typo fix * Clean up test yaml * Finish MALT module prior UNZIP and MALT_BUILD modiules * Add required modules for tests * Sync test out with malt-build * Fix input parameters in tests based on final build module * Update modules/malt/run/meta.yml Co-authored-by: Gregor Sturm <mail@gregor-sturm.de> Co-authored-by: Gregor Sturm <mail@gregor-sturm.de> 2021-08-04 09:06:08 +00:00			`tags:`
			`- malt/run`
Update MALT to older version due to major bug in most recent version (#1796) * Rollback version * Start work rollback to 0.4.1 * Further changes * Re do dynamic flag creation * Prettier. 2022-06-20 06:20:22 +00:00			`- malt`
module: MALT/RUN (#646) * Specify more guidelines on input channels * Linting * Updates based on code review * Update README.md * Fix broken sentence * Add MALT with incomplete tests * Parameter typo fix * Clean up test yaml * Finish MALT module prior UNZIP and MALT_BUILD modiules * Add required modules for tests * Sync test out with malt-build * Fix input parameters in tests based on final build module * Update modules/malt/run/meta.yml Co-authored-by: Gregor Sturm <mail@gregor-sturm.de> Co-authored-by: Gregor Sturm <mail@gregor-sturm.de> 2021-08-04 09:06:08 +00:00			`files:`
Add missing $prefix definition for MALT_RUN (#1373) * fix: remove left-over unnecessary code * Add forgotten prefix for the log * Update meta.yml * Update tests Co-authored-by: Sateesh Peri <33637490+sateeshperi@users.noreply.github.com> 2022-03-03 16:58:04 +00:00			`- path: output/malt/test-malt-run.log`
Update MALT to older version due to major bug in most recent version (#1796) * Rollback version * Start work rollback to 0.4.1 * Further changes * Re do dynamic flag creation * Prettier. 2022-06-20 06:20:22 +00:00			`contains:`
			`- "Peak memory"`
			`- path: output/malt/test_1.rma6`