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20 lines
552 B
Text
20 lines
552 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { SEACR_CALLPEAK } from '../../../software/seacr/callpeak/main.nf' addParams( options: [ args:'norm stringent' ] )
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workflow test_seacr_callpeak {
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def input = []
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input = [[ id:'test_1'],
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file("${launchDir}/tests/data/bedgraph/K27me3_1_to_chr20.bedgraph", checkIfExists: true),
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file("${launchDir}/tests/data/bedgraph/IgG_1_to_chr20.bedgraph", checkIfExists: true) ]
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SEACR_CALLPEAK ( input )
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}
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// For local testing
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workflow {
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test_seacr_callpeak()
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}
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