nf-core_modules/tools/fastqc/test/main.nf

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#!/usr/bin/env nextflow
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nextflow.preview.dsl = 2
include '../../../nf-core/module_testing/check_process_outputs.nf' params(params)
include '../main.nf' params(params)
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// Define input channels
readPaths = [
['SRR389222_sub1', ['https://github.com/nf-core/test-datasets/raw/methylseq/testdata/SRR389222_sub1.fastq.gz']],
['SRR389222_sub2', ['https://github.com/nf-core/test-datasets/raw/methylseq/testdata/SRR389222_sub2.fastq.gz']],
['SRR389222_sub3', ['https://github.com/nf-core/test-datasets/raw/methylseq/testdata/SRR389222_sub3.fastq.gz']]
]
Channel
.from(readPaths)
.map { row -> [ row[0], [row[1][0]]] }
.set { ch_read_files }
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// Run the workflow
workflow {
fastqc(ch_read_files)
// .check_output()
}