mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-11 04:33:10 +00:00
15 lines
413 B
Text
15 lines
413 B
Text
|
#!/usr/bin/env nextflow
|
||
|
|
|
||
|
|
nextflow.enable.dsl = 2
|
||
|
|
|
||
|
|
include { BAMTOOLS_SPLIT } from '../../../../modules/bamtools/split/main.nf' addParams( options: [args:"-reference"] )
|
||
|
|
|
||
|
|
workflow test_bamtools_split {
|
||
|
|
|
||
|
|
input = [
|
||
|
|
[ id:'test', single_end:false ], // meta map
|
||
|
|
file(params.test_data['homo_sapiens']['illumina']['test_paired_end_sorted_bam'], checkIfExists: true) ]
|
||
|
|
|
||
|
|
BAMTOOLS_SPLIT ( input )
|
||
|
|
}
|