2021-03-08 13:45:46 +00:00
|
|
|
name: gatk4_createsequencedictionary
|
2021-02-16 12:40:06 +00:00
|
|
|
description: Creates a sequence dictionary for a reference sequence
|
|
|
|
keywords:
|
|
|
|
- dictionary
|
|
|
|
- fasta
|
|
|
|
tools:
|
|
|
|
- gatk:
|
|
|
|
description: |
|
|
|
|
Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools
|
|
|
|
with a primary focus on variant discovery and genotyping. Its powerful processing engine
|
|
|
|
and high-performance computing features make it capable of taking on projects of any size.
|
|
|
|
homepage: https://gatk.broadinstitute.org/hc/en-us
|
|
|
|
documentation: https://gatk.broadinstitute.org/hc/en-us/categories/360002369672s
|
|
|
|
doi: 10.1158/1538-7445.AM2017-3590
|
2021-10-22 22:39:54 +00:00
|
|
|
licence: ['Apache-2.0']
|
|
|
|
|
2021-02-16 12:40:06 +00:00
|
|
|
input:
|
|
|
|
- fasta:
|
|
|
|
type: file
|
|
|
|
description: Input fasta file
|
|
|
|
pattern: "*.{fasta,fa}"
|
|
|
|
output:
|
2021-02-16 22:07:51 +00:00
|
|
|
- dict:
|
2021-02-16 12:40:06 +00:00
|
|
|
type: file
|
|
|
|
description: gatk dictionary file
|
|
|
|
pattern: "*.{dict}"
|
2021-10-03 07:20:26 +00:00
|
|
|
- versions:
|
2021-02-16 12:40:06 +00:00
|
|
|
type: file
|
2021-10-03 07:20:26 +00:00
|
|
|
description: File containing software versions
|
2021-09-27 08:41:24 +00:00
|
|
|
pattern: "versions.yml"
|
2021-02-16 12:40:06 +00:00
|
|
|
authors:
|
|
|
|
- "@maxulysse"
|