nf-core_modules/tests/software/ucsc/bedgraphtobigwig/main.nf

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#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
2021-02-03 16:20:02 +00:00
include { UCSC_BEDGRAPHTOBIGWIG } from '../../../../software/ucsc/bedgraphtobigwig/main.nf' addParams( options: [:] )
workflow test_ucsc_bedgraphtobigwig {
input = [ [ id:'test' ], // meta map
[ file('https://raw.githubusercontent.com/igvteam/igv.js/master/test/data/wig/bedgraph-example-uscs.bedgraph', checkIfExists: true) ]
]
sizes = file('https://raw.githubusercontent.com/igvteam/igv.js/master/test/data/wig/chrom.sizes', checkIfExists: true)
UCSC_BEDGRAPHTOBIGWIG ( input, sizes )
}