nf-core_modules/software/seqkit/split2/meta.yml

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name: seqkit_split2
description: Split single or paired-end fastq.gz files
keywords:
- split
- fastq
tools:
- seqkit:
description: |
Cross-platform and ultrafast toolkit for FASTA/Q file manipulation, written by Wei Shen.
homepage: https://github.com/shenwei356/seqkit
documentation: https://bioinf.shenwei.me/seqkit/
doi: 10.1371/journal.pone.0163962
input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- reads:
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type: file
description: FastQ files
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pattern: "*.{fq.gz/fastq.gz}"
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output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- reads:
type: file
description: Split fastq files
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pattern: "*.{fq.gz/fastq.gz}"
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- version:
type: file
description: File containing software version
pattern: "*.{version.txt}"
authors:
- "@FriederikeHanssen"