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20 lines
574 B
Text
20 lines
574 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { FASTK_FASTK } from '../../../modules/fastk/fastk/main.nf'
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include { FASTK_HISTEX } from '../../../modules/fastk/histex/main.nf'
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include { GENESCOPEFK } from '../../../modules/genescopefk/main.nf'
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workflow test_genescopefk {
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input = [
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[ id:'test' , single_end: true ], // meta map
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file(params.test_data['homo_sapiens']['illumina']['test_1_fastq_gz'], checkIfExists: true)
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]
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FASTK_FASTK ( input )
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FASTK_HISTEX ( FASTK_FASTK.out.hist )
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GENESCOPEFK ( FASTK_HISTEX.out.hist )
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}
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