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25 lines
949 B
Text
25 lines
949 B
Text
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##fileformat=VCFv4.2
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##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
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##reference=file://some/path/human_g1k_v37.fasta
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##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
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##INFO=<ID=MinDP,Number=1,Type=Integer,Description="Dummy">
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##ALT=<ID=DEL,Description="Deletion">
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##contig=<ID=1,assembly=b37,length=249250621>
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##contig=<ID=2,assembly=b37,length=249250621>
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#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT NA001
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1 5 . C A . PASS . GT 0/1
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1 5 . C T . PASS . GT 0/1
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1 7 . T A . PASS . GT .
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1 10 . G A . PASS . GT 0/1
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1 12 . GACA GA . PASS . GT 0/1
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1 16 . T TAAA . PASS . GT 1/1
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1 19 . A C . PASS . GT 0/1
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1 61 . C A . PASS . GT 0/1
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2 61 . agag aa . PASS . GT 0/1
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2 119 . aaa t . PASS . GT 0/1
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2 179 . g gacgtacgt . PASS . GT 0/1
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2 200 . a <DEL> . PASS END=210 GT 1/0
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2 300 . a . . PASS END=310;MinDP=10 GT 0/1
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2 320 . a <*> . PASS END=330;MinDP=20 GT 0/1
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2 481 . t c,a . PASS . GT 0/2
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