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15 lines
546 B
Text
15 lines
546 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { COOLER_ZOOMIFY } from '../../../../modules/cooler/zoomify/main.nf' addParams( options: ['args':'-r 2,4,8', publish_files:[:]] )
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include { COOLER_DUMP } from '../../../../modules/cooler/dump/main.nf' addParams( options: [:] )
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workflow test_cooler_zoomify {
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input = [ [ id:'test' ], // meta map
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file(params.test_data['generic']['cooler']['test_merge_cool'], checkIfExists: true)]
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COOLER_ZOOMIFY ( input )
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COOLER_DUMP(COOLER_ZOOMIFY.out.mcool, "/resolutions/2")
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}
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