nf-core_modules/tests/modules/fastqscan/main.nf

14 lines
376 B
Text
Raw Normal View History

#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { FASTQSCAN } from '../../../modules/fastqscan/main.nf' addParams( options: [ args: "-g 30000"] )
workflow test_fastqscan {
input = [ [ id:'test', single_end:true ], // meta map
file(params.test_data['sarscov2']['illumina']['test_1_fastq_gz'], checkIfExists: true) ]
FASTQSCAN ( input )
}