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17 lines
484 B
Text
17 lines
484 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { ISOSEQ3_REFINE } from '../../../../modules/isoseq3/refine/main' addParams( options: [suffix:'.refine'] )
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workflow test_isoseq3_refine {
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input = [
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[ id:'test' ], // meta map
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file(params.test_data['homo_sapiens']['pacbio']['lima'], checkIfExists: true),
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]
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primers = file(params.test_data['homo_sapiens']['pacbio']['primers'], checkIfExists: true)
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ISOSEQ3_REFINE ( input, primers )
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}
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