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15 lines
444 B
Text
15 lines
444 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { NUCMER } from '../../../modules/nucmer/main.nf' addParams( options: [:] )
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workflow test_nucmer {
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input = [ [ id:'test', single_end:false ], // meta map
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file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true),
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file(params.test_data['sarscov2']['genome']['transcriptome_fasta'], checkIfExists: true) ]
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NUCMER ( input )
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}
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