mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-11 04:33:10 +00:00
17 lines
658 B
Text
17 lines
658 B
Text
|
#!/usr/bin/env nextflow
|
||
|
|
||
|
nextflow.enable.dsl = 2
|
||
|
|
||
|
include { PIRATE } from '../../../modules/pirate/main.nf' addParams( options: [:] )
|
||
|
|
||
|
workflow test_pirate {
|
||
|
|
||
|
input = [ [ id:'test', single_end:false ], // meta map
|
||
|
[ file("https://github.com/bactopia/bactopia-tests/raw/main/data/reference/gff/GCF_000292685.gff", checkIfExists: true),
|
||
|
file("https://github.com/bactopia/bactopia-tests/raw/main/data/reference/gff/GCF_000298385.gff", checkIfExists: true),
|
||
|
file("https://github.com/bactopia/bactopia-tests/raw/main/data/reference/gff/GCF_002849995.gff", checkIfExists: true) ]
|
||
|
]
|
||
|
|
||
|
PIRATE ( input )
|
||
|
}
|